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lumiBarnes

Barnes Benchmark Illumina Tissues Titration Data

Bioconductor version: 3.23 · Package version: 1.52.0

The Barnes benchmark dataset can be used to evaluate the algorithms for Illumina microarrays. It measured a titration series of two human tissues, blood and placenta, and includes six samples with the titration ratio of blood and placenta as 100:0, 95:5, 75:25, 50:50, 25:75 and 0:100. The samples were hybridized on HumanRef-8 BeadChip (Illumina, Inc) in duplicate. The data is loaded as an LumiBatch Object (see documents in the lumi package).

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("lumiBarnes")

Details

MaintainerPan Du <dupan@northwestern.edu>
AuthorPan Du
LicenseLGPL
Downloads rank391
Source branchRELEASE_3_23
biocViewsChipOnChipData, ExperimentData, MicroarrayData, Tissue

Download

Follow the installation instructions to use this package in your R session.

Source packagelumiBarnes_1.52.0.tar.gz
Dependencies

Depends: R (>= 2.0), Biobase (>= 2.5.5), lumi (>= 1.1.0)

Reverse dependencies

Suggests Me (2): arrayMvout, lumi