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VariantToolsData

Data for the VariantTools tutorial

Bioconductor version: 3.23 · Package version: 1.36.0

Data from the sequencing of a 50/50 mixture of HapMap trio samples NA12878 (CEU) and NA19240 (YRI), subset to the TP53 region.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("VariantToolsData")

Details

MaintainerMichael Lawrence <michafla@gene.com>
AuthorMichael Lawrence
LicenseArtistic-2.0
Downloads rank156
Source branchRELEASE_3_23
biocViewsExperimentData, HapMap, SNPData, SequencingData

Download

Follow the installation instructions to use this package in your R session.

Source packageVariantToolsData_1.36.0.tar.gz
Dependencies

Depends: R (>= 3.5.0), VariantAnnotation (>= 1.7.35)

Imports: BiocGenerics, GenomicRanges

Suggests: VariantTools (>= 1.3.4), gmapR (>= 1.3.3), BiocStyle