Bioc2026 Registration Open!

GSE62944

GEO accession data GSE62944 as a SummarizedExperiment

Bioconductor version: 3.23 · Package version: 1.40.0

TCGA processed RNA-Seq data for 9264 tumor and 741 normal samples across 24 cancer types and made them available as GEO accession [GSE62944](http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE62944). GSE62944 data have been parsed into a SummarizedExperiment object available in ExperimentHub.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GSE62944")

Details

MaintainerBioconductor Package Maintainer <maintainer@bioconductor.org>
AuthorSonali Arora
LicenseArtistic-2.0
URLhttp://bioconductor.org/packages/release/bioc/html/GSE62944.html
Downloads rank203
Source branchRELEASE_3_23
biocViewsDNASeqData, ExperimentData, Genome, RNASeqData

Download

Follow the installation instructions to use this package in your R session.

Source packageGSE62944_1.40.0.tar.gz
Dependencies

Depends: Biobase, GEOquery

Suggests: ExperimentHub (>= 0.99.6), knitr, BiocStyle, rmarkdown, DESeq2

Reverse dependencies

Suggests Me (1): GSEABenchmarkeR