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EGSEAdata

Gene set collections for the EGSEA package

Bioconductor version: 3.23 · Package version: 1.40.0

This package includes gene set collections that are used for the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. It includes Human and Mouse versions of the MSidDB (Subramanian, et al. (2005) PNAS, 102(43):15545-15550) and GeneSetDB (Araki, et al. (2012) FEBS Open Bio, 2:76-82) collections.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EGSEAdata")

Details

MaintainerMonther Alhamdoosh <m.hamdoosh@gmail.com>
AuthorMonther Alhamdoosh, Yifang Hu and Gordon K. Smyth
Licensefile LICENSE
Downloads rank262
Source branchRELEASE_3_23
biocViewsExperimentData, Homo_sapiens_Data, Mus_musculus_Data, Rattus_norvegicus_Data

Download

Follow the installation instructions to use this package in your R session.

Source packageEGSEAdata_1.40.0.tar.gz
Dependencies

Depends: R (>= 3.4)

Suggests: EGSEA

Reverse dependencies

Imports Me (1): EGSEA