BSgenome.Hsapiens.UCSC.hg19

Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)

Bioconductor version: 3.23 · Package version: 1.4.3

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg19, based on GRCh37.p13) and stored in Biostrings objects.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Hsapiens.UCSC.hg19")

Maintainer	Bioconductor Package Maintainer <maintainer@bioconductor.org>
Author	The Bioconductor Dev Team
License	Artistic-2.0
Downloads rank	2638
Source branch	RELEASE_3_23
biocViews	AnnotationData, BSgenome, Genetics, Homo_sapiens

Follow the installation instructions to use this package in your R session.

Source package

Dependencies

Depends: BSgenome (>= 1.54.0)

Imports: BSgenome

Reverse dependencies

Depends On Me (7): annotation, BSgenome.Hsapiens.UCSC.hg19.masked, CODEX, SCOPE, sequencing, traseR, variants

Imports Me (12): appreci8R, BSgenome.Hsapiens.UCSC.hg19.masked, cfDNAPro, circRNAprofiler, decompTumor2Sig, epiregulon, HiLDA, katdetectr, musicatk, RareVariantVis, RCAS, YAPSA