BSgenome.Drerio.UCSC.danRer10

Full genome sequences for Danio rerio (UCSC version danRer10)

Bioconductor version: 3.23 · Package version: 1.4.2

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer10, Sep. 2014) and stored in Biostrings objects.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Drerio.UCSC.danRer10")

Maintainer	Bioconductor Package Maintainer <maintainer@bioconductor.org>
Author	The Bioconductor Dev Team
License	Artistic-2.0
Downloads rank	134
Source branch	RELEASE_3_23
biocViews	AnnotationData, BSgenome, Danio_rerio, Genetics

Follow the installation instructions to use this package in your R session.

Source package

Dependencies

Depends: BSgenome (>= 1.36.0)

Imports: BSgenome

Suggests: GenomicFeatures

Reverse dependencies

Suggests Me (5): ATACseqTFEA, CNEr, enhancerHomologSearch, periodicDNA, ribosomeProfilingQC