tenXplore
ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics
Bioconductor version: 3.23 · Package version: 1.34.0
Perform ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("tenXplore")Details
| Maintainer | VJ Carey <stvjc@channing.harvard.edu> |
| Author | Vince Carey |
| License | Artistic-2.0 |
| Downloads rank | 518 |
| Source branch | RELEASE_3_23 |
| biocViews | DimensionReduction, ImmunoOncology, PrincipalComponent, SingleCell, Software, Transcriptomics |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | tenXplore_1.34.0.tar.gz |
| Windows binary (x86_64) | tenXplore_1.34.0.zip |
| macOS binary (arm64) | tenXplore_1.34.0.tgz |
| macOS binary (x86_64) | tenXplore_1.34.0.tgz |
Dependencies
Depends: R (>= 4.0), shiny
Imports: methods, ontoProc (>= 0.99.7), SummarizedExperiment, AnnotationDbi, matrixStats, org.Mm.eg.db, stats, utils, BiocFileCache
Suggests: org.Hs.eg.db, testthat, knitr, rmarkdown, BiocStyle