miRBaseConverter

A comprehensive and high-efficiency tool for converting and retrieving the information of miRNAs in different miRBase versions

Bioconductor version: 3.23 · Package version: 1.36.0

A comprehensive tool for converting and retrieving the miRNA Name, Accession, Sequence, Version, History and Family information in different miRBase versions. It can process a huge number of miRNAs in a short time without other depends.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("miRBaseConverter")

Details

Maintainer	Taosheng Xu Taosheng Xu <taosheng.x@gmail.com>
Author	Taosheng Xu Taosheng Xu [aut, cre] (ORCID: <https://orcid.org/0000-0001-8283-7274>)
License	GPL (>= 2)
URL	https://github.com/taoshengxu/miRBaseConverter
Bug Reports	https://github.com/taoshengxu/miRBaseConverter/issues
Downloads rank	609
Source branch	RELEASE_3_23
biocViews	Software, miRNA

Documentation

miRBaseConverter: A comprehensive and high-efficiency tool for converting and retrieving the information of miRNAs in different miRBase versions

Download

Follow the installation instructions to use this package in your R session.

Source package	miRBaseConverter_1.36.0.tar.gz
Windows binary (x86_64)	miRBaseConverter_1.36.0.zip
macOS binary (arm64)	miRBaseConverter_1.36.0.tgz
macOS binary (x86_64)	miRBaseConverter_1.36.0.tgz

Dependencies

Depends: R (>= 3.4)

Imports: stats

Suggests: BiocGenerics, RUnit, knitr, rtracklayer, utils, rmarkdown

Reverse dependencies

Suggests Me (1): EpiMix