ibh
Interaction Based Homogeneity for Evaluating Gene Lists
Bioconductor version: 3.23 · Package version: 1.60.0
This package contains methods for calculating Interaction Based Homogeneity to evaluate fitness of gene lists to an interaction network which is useful for evaluation of clustering results and gene list analysis. BioGRID interactions are used in the calculation. The user can also provide their own interactions.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ibh")Details
| Maintainer | Kircicegi Korkmaz <e102771@ceng.metu.edu.tr> |
| Author | Kircicegi Korkmaz, Volkan Atalay, Rengul Cetin Atalay. |
| License | GPL (>= 2) |
| Downloads rank | 419 |
| Source branch | RELEASE_3_23 |
| biocViews | DataImport, GraphAndNetwork, NetworkEnrichment, QualityControl, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | ibh_1.60.0.tar.gz |
| Windows binary (x86_64) | ibh_1.60.0.zip |
| macOS binary (arm64) | ibh_1.60.0.tgz |
| macOS binary (x86_64) | ibh_1.60.0.tgz |