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fdrame

FDR adjustments of Microarray Experiments (FDR-AME)

Bioconductor version: 3.23 · Package version: 1.84.0

This package contains two main functions. The first is fdr.ma which takes normalized expression data array, experimental design and computes adjusted p-values It returns the fdr adjusted p-values and plots, according to the methods described in (Reiner, Yekutieli and Benjamini 2002). The second, is fdr.gui() which creates a simple graphic user interface to access fdr.ma

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("fdrame")

Details

MaintainerEffi Kenigsberg <effiken.fdrame@gmail.com>
AuthorYoav Benjamini, Effi Kenigsberg, Anat Reiner, Daniel Yekutieli
LicenseGPL (>= 2)
Downloads rank475
Source branchRELEASE_3_23
biocViewsDifferentialExpression, Microarray, MultipleComparison, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagefdrame_1.84.0.tar.gz
Windows binary (x86_64)fdrame_1.84.0.zip
macOS binary (arm64)fdrame_1.84.0.tgz
macOS binary (x86_64)fdrame_1.84.0.tgz
Dependencies

Imports: tcltk, graphics, grDevices, stats, utils