fastLiquidAssociation
functions for genome-wide application of Liquid Association
Bioconductor version: 3.23 · Package version: 1.48.0
This package extends the function of the LiquidAssociation package for genome-wide application. It integrates a screening method into the LA analysis to reduce the number of triplets to be examined for a high LA value and provides code for use in subsequent significance analyses.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("fastLiquidAssociation") Details
| Maintainer | Tina Gunderson <gunderson.tina@gmail.com> |
| Author | Tina Gunderson |
| License | GPL-2 |
| Downloads rank | 465 |
| Source branch | RELEASE_3_23 |
| biocViews | CellBiology, GeneExpression, Genetics, Pathways, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | fastLiquidAssociation_1.48.0.tar.gz |
| Windows binary (x86_64) | fastLiquidAssociation_1.48.0.zip |
| macOS binary (arm64) | fastLiquidAssociation_1.48.0.tgz |
| macOS binary (x86_64) | fastLiquidAssociation_1.48.0.tgz |
Dependencies
Depends: methods, LiquidAssociation, parallel, doParallel, stats, Hmisc, utils
Imports: WGCNA, impute, preprocessCore
Suggests: GOstats, yeastCC, org.Sc.sgd.db