chromPlot
Global visualization tool of genomic data
Bioconductor version: 3.23 · Package version: 1.40.0
Package designed to visualize genomic data along the chromosomes, where the vertical chromosomes are sorted by number, with sex chromosomes at the end.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("chromPlot")Details
| Maintainer | Karen Y. Orostica <korostica09@gmail.com> |
| Author | Ricardo A. Verdugo and Karen Y. Orostica |
| License | GPL (>= 2) |
| Downloads rank | 561 |
| Source branch | RELEASE_3_23 |
| biocViews | Annotation, DataRepresentation, FunctionalGenomics, Genetics, Sequencing, Software, Visualization |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | chromPlot_1.40.0.tar.gz |
| Windows binary (x86_64) | chromPlot_1.40.0.zip |
| macOS binary (arm64) | chromPlot_1.40.0.tgz |
| macOS binary (x86_64) | chromPlot_1.40.0.tgz |
Dependencies
Depends: stats, utils, graphics, grDevices, datasets, base, biomaRt, GenomicRanges, R (>= 3.1.0)
Suggests: qtl, GenomicFeatures, TxDb.Hsapiens.UCSC.hg19.knownGene