GeneticsPed
Pedigree and genetic relationship functions
Bioconductor version: 3.23 · Package version: 1.74.0
Classes and methods for handling pedigree data. It also includes functions to calculate genetic relationship measures as relationship and inbreeding coefficients and other utilities. Note that package is not yet stable. Use it with care!
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GeneticsPed")Details
| Maintainer | David Henderson <DNADavenator@GMail.Com> |
| Author | Gregor Gorjanc and David A. Henderson <DNADavenator@GMail.Com>, with code contributions by Brian Kinghorn and Andrew Percy (see file COPYING) |
| License | LGPL (>= 2.1) | file LICENSE |
| URL | http://rgenetics.org |
| Downloads rank | 424 |
| Source branch | RELEASE_3_23 |
| biocViews | Genetics, Software |
Documentation
- Calculation of genetic relatedness/relationship between individuals in the pedigree
- Pedigree handling
- Quantitative genetic (animal) model example in R
Download
Follow the installation instructions to use this package in your R session.
| Source package | GeneticsPed_1.74.0.tar.gz |
| Windows binary (x86_64) | GeneticsPed_1.74.0.zip |
| macOS binary (x86_64) | GeneticsPed_1.74.0.tgz |