GA4GHshiny
Shiny application for interacting with GA4GH-based data servers
Bioconductor version: 3.23 · Package version: 1.34.0
GA4GHshiny package provides an easy way to interact with data servers based on Global Alliance for Genomics and Health (GA4GH) genomics API through a Shiny application. It also integrates with Beacon Network.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GA4GHshiny")Details
| Maintainer | Welliton Souza <well309@gmail.com> |
| Author | Welliton Souza [aut, cre], Benilton Carvalho [ctb], Cristiane Rocha [ctb], Elizabeth Borgognoni [ctb] |
| License | GPL-3 |
| URL | https://github.com/labbcb/GA4GHshiny |
| Bug Reports | https://github.com/labbcb/GA4GHshiny/issues |
| Downloads rank | 437 |
| Source branch | RELEASE_3_23 |
| biocViews | GUI, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | GA4GHshiny_1.34.0.tar.gz |
| macOS binary (arm64) | GA4GHshiny_1.34.0.tgz |
| macOS binary (x86_64) | GA4GHshiny_1.34.0.tgz |
Dependencies
Depends: GA4GHclient
Imports: AnnotationDbi, BiocGenerics, dplyr, DT, Seqinfo, GenomeInfoDb, openxlsx, GenomicFeatures, methods, purrr, S4Vectors, shiny, shinyjs, tidyr, shinythemes
Suggests: BiocStyle, org.Hs.eg.db, knitr, rmarkdown, testthat, TxDb.Hsapiens.UCSC.hg19.knownGene