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EBSEA

Exon Based Strategy for Expression Analysis of genes

Bioconductor version: 3.23 · Package version: 1.40.0

Calculates differential expression of genes based on exon counts of genes obtained from RNA-seq sequencing data.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EBSEA")

Details

MaintainerArfa Mehmood <arfa.mehmood@utu.fi>
AuthorArfa Mehmood, Asta Laiho, Laura L. Elo
LicenseGPL-2
Downloads rank374
Source branchRELEASE_3_23
biocViewsDifferentialExpression, GeneExpression, Sequencing, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageEBSEA_1.40.0.tar.gz
Windows binary (x86_64)EBSEA_1.40.0.zip
macOS binary (arm64)EBSEA_1.40.0.tgz
macOS binary (x86_64)EBSEA_1.40.0.tgz
Dependencies

Depends: R (>= 4.0.0)

Imports: DESeq2, graphics, stats, EmpiricalBrownsMethod

Suggests: knitr, rmarkdown