BiocHubsShiny

View AnnotationHub and ExperimentHub Resources Interactively

Bioconductor version: 3.23 · Package version: 1.12.0

A package that allows interactive exploration of AnnotationHub and ExperimentHub resources. It uses DT / DataTable to display resources for multiple organisms. It provides template code for reproducibility and for downloading resources via the indicated Hub package.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BiocHubsShiny")

Details

Maintainer	Marcel Ramos <marcel.ramos@sph.cuny.edu>
Author	Marcel Ramos [aut, cre] (ORCID: <https://orcid.org/0000-0002-3242-0582>), Vincent Carey [ctb]
License	Artistic-2.0
URL	https://github.com/Bioconductor/BiocHubsShiny
Bug Reports	https://github.com/Bioconductor/BiocHubsShiny/issues
Downloads rank	351
Source branch	RELEASE_3_23
biocViews	ShinyApps, Software

Documentation

BiocHubsShiny: Interactive Display of Hub Resources

Download

Follow the installation instructions to use this package in your R session.

Source package	BiocHubsShiny_1.12.0.tar.gz
Windows binary (x86_64)	BiocHubsShiny_1.12.0.zip
macOS binary (arm64)	BiocHubsShiny_1.12.0.tgz
macOS binary (x86_64)	BiocHubsShiny_1.12.0.tgz

Dependencies

Depends: R (>= 4.3.0), shiny

Imports: AnnotationHub, ExperimentHub, DT, htmlwidgets, rclipboard, S4Vectors, shinyAce, shinybiocloader, shinyjs, shinythemes, utils

Suggests: BiocManager, BiocStyle, curl, glue, knitr, rmarkdown, sessioninfo, shinytest2