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simpIntLists

The package contains BioGRID interactions for various organisms in a simple format

Bioconductor version: 3.24 · Package version: 1.49.0

The package contains BioGRID interactions for arabidopsis(thale cress), c.elegans, fruit fly, human, mouse, yeast( budding yeast ) and S.pombe (fission yeast) . Entrez ids, official names and unique ids can be used to find proteins. The format of interactions are lists. For each gene/protein, there is an entry in the list with "name" containing name of the gene/protein and "interactors" containing the list of genes/proteins interacting with it.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("simpIntLists")

Details

MaintainerKircicegi Korkmaz <e102771@ceng.metu.edu.tr>
AuthorKircicegi Korkmaz, Volkan Atalay, Rengul Cetin-Atalay
LicenseGPL (>= 2)
Downloads rank212
Source branchdevel
biocViewsArabidopsis_thaliana_Data, ExperimentData

Download

Follow the installation instructions to use this package in your R session.

Source packagesimpIntLists_1.49.0.tar.gz
Reverse dependencies

Depends On Me (1): ibh