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etec16s

Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment

Bioconductor version: 3.24 · Package version: 1.41.0

16S rRNA gene sequencing data to study changes in the faecal microbiota of 12 volunteers during a human challenge study with ETEC (H10407) and subsequent treatment with ciprofloxacin.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("etec16s")

Details

MaintainerJoseph N. Paulson <jpaulson@jimmy.harvard.edu>
AuthorJoseph N. Paulson
LicenseArtistic-2.0
Downloads rank162
Source branchdevel
biocViewsExperimentData, MicrobiomeData, SequencingData

Download

Follow the installation instructions to use this package in your R session.

Source packageetec16s_1.41.0.tar.gz
Dependencies

Depends: R (>= 3.3), Biobase, metagenomeSeq(>= 1.12.0)