aracne.networks
ARACNe-inferred gene networks from TCGA tumor datasets
Bioconductor version: 3.24 · Package version: 1.39.1
This package provides access to ARACNe-inferred gene regulatory networks (regulons) from TCGA tumor datasets. The networks are hosted on Zenodo, downloaded on demand and cached locally with BiocFileCache. The package also contains a function to export them into plain-text format.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("aracne.networks") Details
| Maintainer | Federico M. Giorgi <federico.giorgi@gmail.com> |
| Author | Federico M. Giorgi [aut, cre] (ORCID: <https://orcid.org/0000-0002-7325-9908>), Mariano J. Alvarez [aut] |
| License | file LICENSE |
| URL | https://github.com/federicogiorgi/aracne.networks |
| Bug Reports | https://github.com/federicogiorgi/aracne.networks/issues |
| Downloads rank | 179 |
| Source branch | devel |
| biocViews | CancerData, ExperimentData, Genome, Homo_sapiens_Data |
Download
Follow the installation instructions to use this package in your R session.
| Source package | aracne.networks_1.39.1.tar.gz |