HD2013SGI
Mapping genetic interactions in human cancer cells with RNAi and multiparametric phenotyping
Bioconductor version: 3.24 · Package version: 1.53.2
This package contains the experimental data and a complete executable transcript (vignette) of the analysis of the HCT116 genetic interaction matrix presented in the paper "Mapping genetic interactions in human cancer cells with RNAi and multiparametric phenotyping" by C. Laufer, B. Fischer, M. Billmann, W. Huber, M. Boutros; Nature Methods (2013) 10:427-31. doi: 10.1038/nmeth.2436.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("HD2013SGI") Details
| Maintainer | Hugo Gruson <hugo.gruson@embl.de> |
| Author | Bernd Fischer [aut], Hugo Gruson [cre] |
| License | Artistic-2.0 |
| System Requirements | GNU make |
| Downloads rank | 210 |
| Source branch | devel |
| biocViews | CancerData, CellCulture, ColonCancerData, ExperimentData, HighThroughputImagingData, Homo_sapiens_Data, MicrotitrePlateAssayData |
Download
Follow the installation instructions to use this package in your R session.
| Source package | HD2013SGI_1.53.2.tar.gz |
Dependencies
Depends: R (>= 4.1.0), gplots, geneplotter, splots, limma, vcd, LSD, EBImage, httr2
Imports: grDevices
Suggests: BiocStyle
Reverse dependencies
Suggests Me (1): splots