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GSE280465

EPICv2 Methylation ExperimentHub Data from GEO

Bioconductor version: 3.24 · Package version: 0.99.1

Provides ExperimentHub access to a processed DNA methylation resource derived from GEO accession GSE280465. The resource contains adult Illumina Infinium MethylationEPIC version 2 data from 163 samples across four tissue types, represented as a RangedSummarizedExperiment with beta, M, and CN assays, hg38 genomic ranges, and sample phenotype metadata.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GSE280465")

Details

MaintainerPaul Ruiz <ruizpint@qut.edu.au>
AuthorPaul Ruiz [aut, cre] (ORCID: <https://orcid.org/0009-0007-6714-3566>)
LicenseArtistic-2.0
URLhttps://github.com/paulYRP/GSE280465
Bug Reportshttps://github.com/paulYRP/GSE280465/issues
Downloads rank9
Source branchdevel
biocViewsExperimentData, ExperimentHub, GEO, Homo_sapiens_Data, MethylationArrayData, MicroarrayData, Tissue

Download

Follow the installation instructions to use this package in your R session.

Source packageGSE280465_0.99.1.tar.gz
Dependencies

Depends: R (>= 4.4.0)

Imports: ExperimentHub, utils

Suggests: BiocStyle, ExperimentHubData, knitr, rmarkdown, SummarizedExperiment, testthat (>= 3.0.0)