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GSE103322

GEO accession data GSE103322 as a SingleCellExperiment

Bioconductor version: 3.24 · Package version: 1.19.0

Single cell RNA-Seq data for 5902 cells from 18 patients with oral cavity head and neck squamous cell carcinoma available as GEO accession [GSE103322] (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE103322). GSE103322 data have been parsed into a SincleCellExperiment object available in ExperimentHub.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GSE103322")

Details

MaintainerMariano Alvarez <reef103@gmail.com>
AuthorMariano Alvarez [aut, cre]
LicenseArtistic-2.0
Downloads rank160
Source branchdevel
biocViewsCancerData, DNASeqData, ExperimentData, ExperimentHub, ExpressionData, GEO, Genome, Homo_sapiens_Data, RNASeqData, SingleCellData

Download

Follow the installation instructions to use this package in your R session.

Source packageGSE103322_1.19.0.tar.gz
Dependencies

Depends: Biobase, GEOquery

Suggests: ExperimentHub (>= 0.99.6), knitr, BiocStyle, rmarkdown, SummarizedExperiment, SingleCellExperiment