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DuoClustering2018

Data, Clustering Results and Visualization Functions From Duò et al (2018)

Bioconductor version: 3.24 · Package version: 1.31.0

Preprocessed experimental and simulated scRNA-seq data sets used for evaluation of clustering methods for scRNA-seq data in Duò et al (2018). Also contains results from applying several clustering methods to each of the data sets, and functions for plotting method performance.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DuoClustering2018")

Details

MaintainerAngelo Duò <angelo.duo@icloud.com>
AuthorAngelo Duò, Charlotte Soneson
LicenseGPL (>=2)
Downloads rank272
Source branchdevel
biocViewsExperimentData, SingleCellData

Download

Follow the installation instructions to use this package in your R session.

Source packageDuoClustering2018_1.31.0.tar.gz
Dependencies

Imports: ExperimentHub, utils, magrittr, dplyr, tidyr, mclust, ggplot2, purrr, reshape2, viridis, ggthemes, stats, methods

Suggests: knitr, rmarkdown, BiocStyle, iSEE, scater, SingleCellExperiment, SummarizedExperiment, plyr

Reverse dependencies

Suggests Me (2): corral, scry