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phastCons100way.UCSC.hg38

UCSC phastCons conservation scores for hg38

Bioconductor version: 3.24 · Package version: 3.7.1

Store UCSC phastCons conservation scores for the human genome (hg38) calculated from multiple alignments with other 99 vertebrate species.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("phastCons100way.UCSC.hg38")

Details

MaintainerRobert Castelo <robert.castelo@upf.edu>
AuthorRobert Castelo [aut, cre]
LicenseArtistic-2.0
Downloads rank143
Source branchdevel
biocViewsAnnotationData, Genetics, GenomicScores, Homo_sapiens

Download

Follow the installation instructions to use this package in your R session.

Source packagephastCons100way.UCSC.hg38_3.7.1.tar.gz
Dependencies

Depends: R (>= 3.0.0), GenomicScores (>= 1.3.19)

Imports: utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome

Reverse dependencies

Imports Me (1): primirTSS

Suggests Me (1): GenomicScores