geneplast.data
Input data for the geneplast package via AnnotationHub
Bioconductor version: 3.24 · Package version: 0.99.9
The package geneplast.data provides datasets from different sources via AnnotationHub to use in geneplast pipelines. The datasets have species, phylogenetic trees, and orthology relationships among eukaryotes from different orthologs databases.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("geneplast.data")Details
| Maintainer | Leonardo Campos <leofields@gmail.com> |
| Author | Leonardo Campos [aut, cre], Danilo Imparato [aut], Rodrigo Dalmolin [aut], Mauro Castro [aut] |
| License | Artistic-2.0 |
| Downloads rank | 106 |
| Source branch | devel |
| biocViews | AnnotationData, AnnotationHub, GeneRegulation, Genetics, SystemsBiology |
Download
Follow the installation instructions to use this package in your R session.
| Source package | geneplast.data_0.99.9.tar.gz |
Dependencies
Depends: R (>= 4.0)
Imports: ape, treeio, tibble, tidyr, dplyr, readr, purrr, igraph, geneplast, BiocFileCache
Suggests: geneplast, BiocGenerics, BiocStyle, knitr, rmarkdown
Reverse dependencies
Suggests Me (1): geneplast