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GO.db

A set of annotation maps describing the entire Gene Ontology

Bioconductor version: 3.24 · Package version: 3.23.1

A set of annotation maps describing the entire Gene Ontology assembled using data from GO

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GO.db")

Details

MaintainerBioconductor Package Maintainer <maintainer@bioconductor.org>
AuthorMarc Carlson
LicenseArtistic-2.0
Downloads rank32100
Source branchdevel
biocViewsAnnotationData, FunctionalAnnotation

Download

Follow the installation instructions to use this package in your R session.

Source packageGO.db_3.23.1.tar.gz
Dependencies

Depends: R (>= 2.7.0), methods, AnnotationDbi (>= 1.73.0)

Suggests: DBI

Reverse dependencies

Depends On Me (11): annaffy, BicARE, davidTiling, goProfiles, goTools, Homo.sapiens, Mus.musculus, Rattus.norvegicus, RnaSeqGeneEdgeRQL, SemDist, topGO

Imports Me (38): ADAM, ADAMgui, adSplit, bioCancer, BioNAR, clusterProfiler, CNEr, compEpiTools, consICA, EnrichmentBrowser, ExpHunterSuite, famat, gage, GeneTonic, GenomicInteractionNodes, GOfan, GOpro, GOSemSim, goseq, goSTAG, GOstats, goTools, ideal, MCbiclust, methylGSA, missMethyl, mosdef, NetSAM, netZooR, NoRCE, pcaExplorer, Pigengene, rGREAT, rgsepd, rrvgo, signatureSearch, simplifyEnrichment, ViSEAGO

Suggests Me (55): annotate, AnnotationDbi, AnnotationForge, appreci8R, augere.gsea, BaseSet, BiocSet, BioMartGOGeneSets, CALANGO, Category, categoryCompare, chipenrich.data, ChIPpeakAnno, clValid, conos, dmGsea, DSGEr, EMMA, esetVis, fgga, FGNet, GlobalAncova, globaltest, goat, goSorensen, GSEABase, hpar, InteractiveComplexHeatmap, iSEEpathways, iSEEu, limma, maGUI, MetMashR, mgsa, MLP, msigdb, ontoProc2, oppar, pagoda2, PathwayVote, phenoTest, pRoloc, randomGODB, RforProteomics, RTopper, safe, sand, scde, simona, SomaScan.db, sparrow, SpliceWiz, systemPipeR, TFutils, yeastExpData