BSgenome.Drerio.UCSC.danRer7

Full genome sequences for Danio rerio (UCSC version danRer7)

Bioconductor version: 3.24 · Package version: 1.4.0

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer7, Jul. 2010) and stored in Biostrings objects.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Drerio.UCSC.danRer7")

Maintainer	Bioconductor Package Maintainer <maintainer@bioconductor.org>
Author	The Bioconductor Dev Team
License	Artistic-2.0
Downloads rank	250
Source branch	devel
biocViews	AnnotationData, BSgenome, Danio_rerio, Genetics

Follow the installation instructions to use this package in your R session.

Source package

Dependencies

Depends: BSgenome (>= 1.33.5)

Imports: BSgenome

Suggests: GenomicFeatures

Reverse dependencies

Depends On Me (2): BSgenome.Drerio.UCSC.danRer7.masked, cleanUpdTSeq

Imports Me (1): BSgenome.Drerio.UCSC.danRer7.masked

Suggests Me (5): CAGEr, ChIPpeakAnno, heatmaps, motifbreakR, seqPattern