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BSgenome.Dmelanogaster.UCSC.dm3

Full genome sequences for Drosophila melanogaster (UCSC version dm3)

Bioconductor version: 3.24 · Package version: 1.4.0

Full genome sequences for Drosophila melanogaster (Fly) as provided by UCSC (dm3, Apr. 2006) and stored in Biostrings objects.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Dmelanogaster.UCSC.dm3")

Details

MaintainerBioconductor Package Maintainer <maintainer@bioconductor.org>
AuthorThe Bioconductor Dev Team
LicenseArtistic-2.0
Downloads rank780
Source branchdevel
biocViewsAnnotationData, BSgenome, Drosophila_melanogaster, Genetics

Download

Follow the installation instructions to use this package in your R session.

Source packageBSgenome.Dmelanogaster.UCSC.dm3_1.4.0.tar.gz
Dependencies

Depends: BSgenome (>= 1.33.5)

Imports: BSgenome

Suggests: TxDb.Dmelanogaster.UCSC.dm3.ensGene

Reverse dependencies

Depends On Me (1): BSgenome.Dmelanogaster.UCSC.dm3.masked

Imports Me (1): BSgenome.Dmelanogaster.UCSC.dm3.masked

Suggests Me (8): Biostrings, CAGEr, easyRNASeq, GenomicAlignments, GenomicFeatures, gmapR, memes, PWMEnrich