AHEnsDbs
EnsDbs for AnnotationHub
Bioconductor version: 3.24 · Package version: 1.7.0
Supplies AnnotationHub with EnsDb Ensembl-based annotation databases for all species. EnsDb SQLite databases are generated separately from Ensembl MySQL databases using functions from the ensembldb package employing the Ensembl Perl API.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("AHEnsDbs") Details
| Maintainer | Johannes Rainer <johannes.rainer@eurac.edu> |
| Author | Johannes Rainer |
| License | Artistic-2.0 |
| Downloads rank | 118 |
| Source branch | devel |
| biocViews | AnnotationData, AnnotationHubSoftware, Coverage, DataImport, Sequencing |
Download
Follow the installation instructions to use this package in your R session.
| Source package | AHEnsDbs_1.7.0.tar.gz |
Dependencies
Depends: R (>= 3.4), methods, ensembldb (>= 1.99.10)
Imports: AnnotationHubData (>= 1.5.24)
Suggests: BiocStyle, knitr, AnnotationHub (>= 2.7.13), rmarkdown