sigsquared
Gene signature generation for functionally validated signaling pathways
Bioconductor version: 3.24 · Package version: 1.45.0
By leveraging statistical properties (log-rank test for survival) of patient cohorts defined by binary thresholds, poor-prognosis patients are identified by the sigsquared package via optimization over a cost function reducing type I and II error.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("sigsquared")Details
| Maintainer | UnJin Lee <unjin@uchicago.edu> |
| Author | UnJin Lee |
| License | GPL version 3 |
| Downloads rank | 441 |
| Source branch | devel |
| biocViews | Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | sigsquared_1.45.0.tar.gz |
| Windows binary (x86_64) | sigsquared_1.45.0.zip |
| macOS binary (arm64) | sigsquared_1.45.0.tgz |
| macOS binary (x86_64) | sigsquared_1.45.0.tgz |