regsplice
L1-regularization based methods for detection of differential splicing
Bioconductor version: 3.24 · Package version: 1.39.1
Statistical methods for detection of differential splicing (differential exon usage) in RNA-seq and exon microarray data, using L1-regularization (lasso) to improve power.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("regsplice")Details
| Maintainer | Lukas M. Weber <lmweb012@gmail.com> |
| Author | Lukas M. Weber [aut, cre] |
| License | MIT + file LICENSE |
| URL | https://github.com/lmweber/regsplice |
| Bug Reports | https://github.com/lmweber/regsplice/issues |
| Downloads rank | 480 |
| Source branch | devel |
| biocViews | AlternativeSplicing, DifferentialExpression, DifferentialSplicing, ExonArray, ExperimentalDesign, ImmunoOncology, Microarray, RNASeq, Sequencing, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | regsplice_1.39.1.tar.gz |
| Windows binary (x86_64) | regsplice_1.39.1.zip |
| macOS binary (arm64) | regsplice_1.39.1.tgz |
| macOS binary (x86_64) | regsplice_1.39.1.tgz |