rain
Rhythmicity Analysis Incorporating Non-parametric Methods
Bioconductor version: 3.24 · Package version: 1.47.0
This package uses non-parametric methods to detect rhythms in time series. It deals with outliers, missing values and is optimized for time series comprising 10-100 measurements. As it does not assume expect any distinct waveform it is optimal or detecting oscillating behavior (e.g. circadian or cell cycle) in e.g. genome- or proteome-wide biological measurements such as: micro arrays, proteome mass spectrometry, or metabolome measurements.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("rain") Details
| Maintainer | Paul F. Thaben <paul.thaben@charite.de> |
| Author | Paul F. Thaben, Pål O. Westermark |
| License | GPL-2 |
| Downloads rank | 564 |
| Source branch | devel |
| biocViews | Genetics, Microarray, MultipleComparison, Proteomics, Software, SystemsBiology, TimeCourse |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | rain_1.47.0.tar.gz |
| Windows binary (x86_64) | rain_1.47.0.zip |
| macOS binary (arm64) | rain_1.47.0.tgz |
| macOS binary (x86_64) | rain_1.47.0.tgz |