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powerTCR

Model-Based Comparative Analysis of the TCR Repertoire

Bioconductor version: 3.24 · Package version: 1.33.0

This package provides a model for the clone size distribution of the TCR repertoire. Further, it permits comparative analysis of TCR repertoire libraries based on theoretical model fits.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("powerTCR")

Details

MaintainerHillary Koch <hillary.koch01@gmail.com>
AuthorHillary Koch
LicenseArtistic-2.0
Downloads rank581
Source branchdevel
biocViewsBiomedicalInformatics, Clustering, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagepowerTCR_1.33.0.tar.gz
Windows binary (x86_64)powerTCR_1.33.0.zip
macOS binary (arm64)powerTCR_1.33.0.tgz
macOS binary (x86_64)powerTCR_1.33.0.tgz
Dependencies

Imports: cubature, doParallel, evmix, foreach, magrittr, methods, parallel, purrr, stats, truncdist, vegan, VGAM

Suggests: BiocStyle, knitr, rmarkdown, RUnit, BiocGenerics