pepXMLTab
Parsing pepXML files and filter based on peptide FDR.
Bioconductor version: 3.24 · Package version: 1.47.0
Parsing pepXML files based one XML package. The package tries to handle pepXML files generated from different softwares. The output will be a peptide-spectrum-matching tabular file. The package also provide function to filter the PSMs based on FDR.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("pepXMLTab")Details
| Maintainer | Xiaojing Wang <xiaojing.wang@vanderbilt.edu> |
| Author | Xiaojing Wang |
| License | Artistic-2.0 |
| Downloads rank | 411 |
| Source branch | devel |
| biocViews | ImmunoOncology, MassSpectrometry, Proteomics, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | pepXMLTab_1.47.0.tar.gz |
| Windows binary (x86_64) | pepXMLTab_1.47.0.zip |
| macOS binary (arm64) | pepXMLTab_1.47.0.tgz |
| macOS binary (x86_64) | pepXMLTab_1.47.0.tgz |