miRNApath
miRNApath: Pathway Enrichment for miRNA Expression Data
Bioconductor version: 3.24 · Package version: 1.73.0
This package provides pathway enrichment techniques for miRNA expression data. Specifically, the set of methods handles the many-to-many relationship between miRNAs and the multiple genes they are predicted to target (and thus affect.) It also handles the gene-to-pathway relationships separately. Both steps are designed to preserve the additive effects of miRNAs on genes, many miRNAs affecting one gene, one miRNA affecting multiple genes, or many miRNAs affecting many genes.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("miRNApath") Details
| Maintainer | James M. Ward <jmw86069@gmail.com> |
| Author | James M. Ward <jmw86069@gmail.com> with contributions from Yunling Shi, Cindy Richards, John P. Cogswell |
| License | LGPL-2.1 |
| Downloads rank | 427 |
| Source branch | devel |
| biocViews | Annotation, DifferentialExpression, NetworkEnrichment, Pathways, Software, miRNA |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | miRNApath_1.73.0.tar.gz |
| Windows binary (x86_64) | miRNApath_1.73.0.zip |
| macOS binary (arm64) | miRNApath_1.73.0.tgz |
| macOS binary (x86_64) | miRNApath_1.73.0.tgz |
Dependencies
Depends: methods, R (>= 2.7.0)