miRNAmeConverter

Convert miRNA Names to Different miRBase Versions

Bioconductor version: 3.24 · Package version: 1.41.0

Translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("miRNAmeConverter")

Details

Maintainer	Stefan J. Haunsberger <stefan.haunsberger@gmail.com>
Author	Stefan Haunsberger [aut, cre]
License	Artistic-2.0
Downloads rank	407
Source branch	devel
biocViews	Preprocessing, Software, miRNA

Download

Follow the installation instructions to use this package in your R session.

Source package	miRNAmeConverter_1.41.0.tar.gz
Windows binary (x86_64)	miRNAmeConverter_1.41.0.zip
macOS binary (arm64)	miRNAmeConverter_1.41.0.tgz
macOS binary (x86_64)	miRNAmeConverter_1.41.0.tgz

Dependencies

Depends: miRBaseVersions.db

Imports: DBI, AnnotationDbi, reshape2

Suggests: methods, testthat, knitr, rmarkdown

Reverse dependencies

Suggests Me (1): TCGAutils