miRLAB
Dry lab for exploring miRNA-mRNA relationships
Bioconductor version: 3.24 · Package version: 1.43.0
Provide tools exploring miRNA-mRNA relationships, including popular miRNA target prediction methods, ensemble methods that integrate individual methods, functions to get data from online resources, functions to validate the results, and functions to conduct enrichment analyses.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("miRLAB")Details
| Maintainer | Thuc Duy Le <Thuc.Le@unisa.edu.au> |
| Author | Thuc Duy Le, Junpeng Zhang, Mo Chen, Vu Viet Hoang Pham |
| License | GPL (>=2) |
| URL | https://github.com/pvvhoang/miRLAB |
| Downloads rank | 536 |
| Source branch | devel |
| biocViews | GeneExpression, Network, NetworkInference, Software, miRNA |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | miRLAB_1.43.0.tar.gz |
| Windows binary (x86_64) | miRLAB_1.43.0.zip |
| macOS binary (arm64) | miRLAB_1.43.0.tgz |
| macOS binary (x86_64) | miRLAB_1.43.0.tgz |
Dependencies
Imports: methods, stats, utils, RCurl, httr, stringr, Hmisc, energy, entropy, gplots, glmnet, impute, limma, pcalg, TCGAbiolinks, dplyr, SummarizedExperiment, ctc, InvariantCausalPrediction, Category, GOstats, org.Hs.eg.db
Suggests: knitr, BiocGenerics, AnnotationDbi, RUnit, rmarkdown