matchBox
Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis.
Bioconductor version: 3.24 · Package version: 1.55.0
The matchBox package enables comparing ranked vectors of features, merging multiple datasets, removing redundant features, using CAT-plots and Venn diagrams, and computing statistical significance.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("matchBox") Details
| Maintainer | Luigi Marchionni <marchion@jhu.edu>, Anuj Gupta <agupta52@jhu.edu> |
| Author | Luigi Marchionni <marchion@jhu.edu>, Anuj Gupta <agupta52@jhu.edu> |
| License | Artistic-2.0 |
| Downloads rank | 396 |
| Source branch | devel |
| biocViews | Annotation, Microarray, MultipleComparison, Software, Visualization |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | matchBox_1.55.0.tar.gz |
| Windows binary (x86_64) | matchBox_1.55.0.zip |
| macOS binary (arm64) | matchBox_1.55.0.tgz |
| macOS binary (x86_64) | matchBox_1.55.0.tgz |
Dependencies
Depends: R (>= 2.8.0)