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matchBox

Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis.

Bioconductor version: 3.24 · Package version: 1.55.0

The matchBox package enables comparing ranked vectors of features, merging multiple datasets, removing redundant features, using CAT-plots and Venn diagrams, and computing statistical significance.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("matchBox")

Details

MaintainerLuigi Marchionni <marchion@jhu.edu>, Anuj Gupta <agupta52@jhu.edu>
AuthorLuigi Marchionni <marchion@jhu.edu>, Anuj Gupta <agupta52@jhu.edu>
LicenseArtistic-2.0
Downloads rank396
Source branchdevel
biocViewsAnnotation, Microarray, MultipleComparison, Software, Visualization

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagematchBox_1.55.0.tar.gz
Windows binary (x86_64)matchBox_1.55.0.zip
macOS binary (arm64)matchBox_1.55.0.tgz
macOS binary (x86_64)matchBox_1.55.0.tgz
Dependencies

Depends: R (>= 2.8.0)