maser
Mapping Alternative Splicing Events to pRoteins
Bioconductor version: 3.24 · Package version: 1.31.0
This package provides functionalities for downstream analysis, annotation and visualizaton of alternative splicing events generated by rMATS.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("maser")Details
| Maintainer | Diogo F.T. Veiga <diogof.veiga@gmail.com> |
| Author | Diogo F.T. Veiga [aut, cre] |
| License | MIT + file LICENSE |
| URL | https://github.com/DiogoVeiga/maser |
| Bug Reports | https://github.com/DiogoVeiga/maser/issues |
| Downloads rank | 607 |
| Source branch | devel |
| biocViews | AlternativeSplicing, Software, Transcriptomics, Visualization |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | maser_1.31.0.tar.gz |
| Windows binary (x86_64) | maser_1.31.0.zip |
| macOS binary (arm64) | maser_1.31.0.tgz |
| macOS binary (x86_64) | maser_1.31.0.tgz |
Dependencies
Depends: R (>= 3.5.0), ggplot2, GenomicRanges
Imports: dplyr, rtracklayer, reshape2, Gviz, DT, Seqinfo, stats, utils, IRanges, methods, BiocGenerics, parallel, data.table
Suggests: testthat, knitr, rmarkdown, BiocStyle, AnnotationHub