gep2pep
Creation and Analysis of Pathway Expression Profiles (PEPs)
Bioconductor version: 3.24 · Package version: 1.33.0
Pathway Expression Profiles (PEPs) are based on the expression of pathways (defined as sets of genes) as opposed to individual genes. This package converts gene expression profiles to PEPs and performs enrichment analysis of both pathways and experimental conditions, such as "drug set enrichment analysis" and "gene2drug" drug discovery analysis respectively.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("gep2pep")Details
| Maintainer | Francesco Napolitano <franapoli@gmail.com> |
| Author | Francesco Napolitano <franapoli@gmail.com> |
| License | GPL-3 |
| Downloads rank | 373 |
| Source branch | devel |
| biocViews | DifferentialExpression, DimensionReduction, GO, GeneExpression, GeneSetEnrichment, Pathways, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | gep2pep_1.33.0.tar.gz |
| Windows binary (x86_64) | gep2pep_1.33.0.zip |
| macOS binary (arm64) | gep2pep_1.33.0.tgz |
| macOS binary (x86_64) | gep2pep_1.33.0.tgz |