drawProteins

Package to Draw Protein Schematics from Uniprot API output

Bioconductor version: 3.24 · Package version: 1.33.0

This package draws protein schematics from Uniprot API output. From the JSON returned by the GET command, it creates a dataframe from the Uniprot Features API. This dataframe can then be used by geoms based on ggplot2 and base R to draw protein schematics.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("drawProteins")

Details

Maintainer	Paul Brennan <brennanpincardiff@gmail.com>
Author	Paul Brennan [aut, cre]
License	MIT + file LICENSE
URL	https://github.com/brennanpincardiff/drawProteins
Bug Reports	https://github.com/brennanpincardiff/drawProteins/issues/new
Downloads rank	486
Source branch	devel
biocViews	FunctionalPrediction, Proteomics, Software, Visualization

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source package	drawProteins_1.33.0.tar.gz
Windows binary (x86_64)	drawProteins_1.33.0.zip
macOS binary (arm64)	drawProteins_1.33.0.tgz
macOS binary (x86_64)	drawProteins_1.33.0.tgz

Dependencies

Depends: R (>= 4.0)

Imports: ggplot2, httr, dplyr, readr, tidyr

Suggests: covr, testthat, knitr, rmarkdown, BiocStyle

Reverse dependencies

Imports Me (1): factR