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cnvGSA

Gene Set Analysis of (Rare) Copy Number Variants

Bioconductor version: 3.24 · Package version: 1.57.0

This package is intended to facilitate gene-set association with rare CNVs in case-control studies.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("cnvGSA")

Details

MaintainerJoseph Lugo <joseph.r.lugo@gmail.com>
AuthorDaniele Merico <daniele.merico@gmail.com>, Robert Ziman <rziman@gmail.com>; packaged by Joseph Lugo <joseph.r.lugo@gmail.com>
LicenseLGPL
Downloads rank484
Source branchdevel
biocViewsMultipleComparison, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagecnvGSA_1.57.0.tar.gz
Windows binary (x86_64)cnvGSA_1.57.0.zip
macOS binary (arm64)cnvGSA_1.57.0.tgz
macOS binary (x86_64)cnvGSA_1.57.0.tgz
Dependencies

Depends: brglm, doParallel, foreach, GenomicRanges, methods, splitstackshape

Suggests: cnvGSAdata, org.Hs.eg.db

Reverse dependencies

Depends On Me (1): cnvGSAdata