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bettr

A Better Way To Explore What Is Best

Bioconductor version: 3.24 · Package version: 1.9.0

bettr provides a set of interactive visualization methods to explore the results of a benchmarking study, where typically more than a single performance measures are computed. The user can weight the performance measures according to their preferences. Performance measures can also be grouped and aggregated according to additional annotations.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("bettr")

Details

MaintainerCharlotte Soneson <charlottesoneson@gmail.com>
AuthorFederico Marini [aut] (ORCID: <https://orcid.org/0000-0003-3252-7758>), Charlotte Soneson [aut, cre] (ORCID: <https://orcid.org/0000-0003-3833-2169>), Daniel Incicau [aut] (ORCID: <https://orcid.org/0009-0001-1748-6145>)
LicenseMIT + file LICENSE
URLhttps://github.com/federicomarini/bettr
Bug Reportshttps://github.com/federicomarini/bettr/issues
Downloads rank330
Source branchdevel
biocViewsGUI, ShinyApps, Software, Visualization

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagebettr_1.9.0.tar.gz
Windows binary (x86_64)bettr_1.9.0.zip
macOS binary (arm64)bettr_1.9.0.tgz
macOS binary (x86_64)bettr_1.9.0.tgz
Dependencies

Depends: R (>= 4.4.0)

Imports: dplyr (>= 1.0), tidyr, ggplot2 (>= 3.4.1), shiny (>= 1.6), tibble, ComplexHeatmap, bslib, rlang, circlize, stats, grid, methods, cowplot, Hmisc, sortable, shinyjqui, grDevices, scales, DT, SummarizedExperiment, S4Vectors, jsonlite, utils

Suggests: knitr, rmarkdown, testthat (>= 3.0.0), BiocStyle