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MPFE

Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data

Bioconductor version: 3.24 · Package version: 1.49.0

Estimate distribution of methylation patterns from a table of counts from a bisulphite sequencing experiment given a non-conversion rate and read error rate.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MPFE")

Details

MaintainerConrad Burden <conrad.burden@anu.edu.au>
AuthorPeijie Lin, Sylvain Foret, Conrad Burden
LicenseGPL (>= 3)
Downloads rank327
Source branchdevel
biocViewsDNAMethylation, HighThroughputSequencingData, MethylSeq, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageMPFE_1.49.0.tar.gz
Windows binary (x86_64)MPFE_1.49.0.zip
macOS binary (arm64)MPFE_1.49.0.tgz
macOS binary (x86_64)MPFE_1.49.0.tgz