MACSr
MACS: Model-based Analysis for ChIP-Seq
Bioconductor version: 3.24 · Package version: 1.21.1
The Model-based Analysis of ChIP-Seq (MACS) is a widely used toolkit for identifying transcript factor binding sites. This package is an R wrapper of the lastest MACS3.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MACSr")Details
| Maintainer | Qiang Hu <Qiang.Hu@roswellpark.org> |
| Author | Philippa Doherty [aut], Qiang Hu [aut, cre] |
| License | BSD_3_clause + file LICENSE |
| Downloads rank | 399 |
| Source branch | devel |
| biocViews | ATACSeq, ChIPSeq, ImmunoOncology, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | MACSr_1.21.1.tar.gz |
| macOS binary (arm64) | MACSr_1.21.1.tgz |
| macOS binary (x86_64) | MACSr_1.21.1.tgz |
Dependencies
Depends: R (>= 4.1.0)
Imports: utils, reticulate, S4Vectors, methods, basilisk, ExperimentHub, AnnotationHub