Informeasure

R implementation of information measures

Bioconductor version: 3.24 · Package version: 1.23.0

This package consolidates a comprehensive set of information measurements, encompassing mutual information, conditional mutual information, interaction information, partial information decomposition, and part mutual information.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Informeasure")

Details

Maintainer	Chu Pan <chu.pan@hnu.edu.cn>
Author	Chu Pan [aut, cre]
License	Artistic-2.0
URL	https://github.com/chupan1218/Informeasure
Bug Reports	https://github.com/chupan1218/Informeasure/issues
Downloads rank	306
Source branch	devel
biocViews	GeneExpression, Network, NetworkInference, Software

Documentation

Informeasure: a tool to quantify nonlinear dependence between variables in biological regulatory networks from an information theory perspective

Download

Follow the installation instructions to use this package in your R session.

Source package	Informeasure_1.23.0.tar.gz
Windows binary (x86_64)	Informeasure_1.23.0.zip
macOS binary (arm64)	Informeasure_1.23.0.tgz
macOS binary (x86_64)	Informeasure_1.23.0.tgz

Dependencies

Depends: R (>= 4.0)

Imports: entropy

Suggests: knitr, BiocStyle, rmarkdown, testthat (>= 3.0.0), SummarizedExperiment