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IMMAN

Interlog protein network reconstruction by Mapping and Mining ANalysis

Bioconductor version: 3.24 · Package version: 1.33.0

Reconstructing Interlog Protein Network (IPN) integrated from several Protein protein Interaction Networks (PPINs). Using this package, overlaying different PPINs to mine conserved common networks between diverse species will be applicable.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("IMMAN")

Details

MaintainerMinoo Ashtiani <ashtiani.minoo@gmail.com>
AuthorMinoo Ashtiani, Payman Nickchi, Abdollah Safari, Mehdi Mirzaie, Mohieddin Jafari
LicenseArtistic-2.0
Downloads rank343
Source branchdevel
biocViewsAlignment, GraphAndNetwork, Network, Proteomics, SequenceMatching, Software, SystemsBiology

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageIMMAN_1.33.0.tar.gz
Windows binary (x86_64)IMMAN_1.33.0.zip
macOS binary (arm64)IMMAN_1.33.0.tgz
macOS binary (x86_64)IMMAN_1.33.0.tgz
Dependencies

Imports: STRINGdb, pwalign, igraph, graphics, utils, seqinr

Suggests: knitr, rmarkdown, testthat