GSALightning
Fast Permutation-based Gene Set Analysis
Bioconductor version: 3.24 · Package version: 1.41.0
GSALightning provides a fast implementation of permutation-based gene set analysis for two-sample problem. This package is particularly useful when testing simultaneously a large number of gene sets, or when a large number of permutations is necessary for more accurate p-values estimation.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GSALightning")Details
| Maintainer | Billy Heung Wing Chang <billyheungwing@gmail.com> |
| Author | Billy Heung Wing Chang |
| License | GPL (>=2) |
| URL | https://github.com/billyhw/GSALightning |
| Bug Reports | https://github.com/billyhw/GSALightning/issues |
| Downloads rank | 389 |
| Source branch | devel |
| biocViews | BiologicalQuestion, DifferentialExpression, GeneExpression, GeneSetEnrichment, Software, Transcription |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | GSALightning_1.41.0.tar.gz |
| Windows binary (x86_64) | GSALightning_1.41.0.zip |
| macOS binary (arm64) | GSALightning_1.41.0.tgz |
| macOS binary (x86_64) | GSALightning_1.41.0.tgz |