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GLAD

Gain and Loss Analysis of DNA

Bioconductor version: 3.24 · Package version: 2.77.0

Analysis of array CGH data : detection of breakpoints in genomic profiles and assignment of a status (gain, normal or loss) to each chromosomal regions identified.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GLAD")

Details

MaintainerPhilippe Hupe <glad@curie.fr>
AuthorPhilippe Hupe
LicenseGPL-2
URLhttp://bioinfo.curie.fr
System Requirementsgsl. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.
Downloads rank751
Source branchdevel
biocViewsCopyNumberVariation, Microarray, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageGLAD_2.77.0.tar.gz
Windows binary (x86_64)GLAD_2.77.0.zip
macOS binary (arm64)GLAD_2.77.0.tgz
macOS binary (x86_64)GLAD_2.77.0.tgz
Dependencies

Depends: R (>= 2.10)

Imports: aws

Reverse dependencies

Depends On Me (1): ITALICS

Imports Me (2): ITALICS, MANOR

Suggests Me (2): aroma.cn, aroma.core