FitHiC
Confidence estimation for intra-chromosomal contact maps
Bioconductor version: 3.24 · Package version: 1.39.0
Fit-Hi-C is a tool for assigning statistical confidence estimates to intra-chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("FitHiC")Details
| Maintainer | Ruyu Tan <rut003@ucsd.edu> |
| Author | Ferhat Ay [aut] (Python original, https://noble.gs.washington.edu/proj/fit-hi-c/), Timothy L. Bailey [aut], William S. Noble [aut], Ruyu Tan [aut, cre, trl] (R port) |
| License | GPL (>= 2) |
| Downloads rank | 310 |
| Source branch | devel |
| biocViews | DNA3DStructure, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | FitHiC_1.39.0.tar.gz |
| Windows binary (x86_64) | FitHiC_1.39.0.zip |
| macOS binary (arm64) | FitHiC_1.39.0.tgz |
| macOS binary (x86_64) | FitHiC_1.39.0.tgz |